Genomic Location: HiC_scaffold_295:347844...350429
NR annotation: CAB4014417.1, ATP-dependent DNA helicase [Paramuricea clavata]
| CDS | ||||
| evm.model.HiC_scaffold_295.37 | ||||
| Transcript |
| evm.model.HiC_scaffold_295.37 |
| Protein |
| evm.model.HiC_scaffold_295.37 |
| Uniprot term | Description |
|---|---|
| P35187 | ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SGS1 PE=1 SV=1 |
| Q09811 | ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rqh1 PE=1 SV=1 |
| O18017 | RecQ-like DNA helicase blm-1 OS=Caenorhabditis elegans OX=6239 GN=him-6 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF09382 | RQC | RQC domain | Domain | Interproscan |
| PF16124 | RecQ_Zn_bind | RecQ zinc-binding | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR004589 | Family | DNA helicase, ATP-dependent, RecQ type | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR018982 | Domain | RQC domain | Interproscan |
| IPR032284 | Domain | ATP-dependent DNA helicase RecQ, zinc-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13710 | DNA HELICASE RECQ FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006260 | Biological Process | DNA replication | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0043138 | Molecular Function | 3'-5' DNA helicase activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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