Gene detail

Detailed information of evm.model.HiC_scaffold_295.40 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_295:378258...379943
NR annotation: XP_042192157.1, homeobox protein Dlx1a isoform X2 [Callorhinchus milii]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q98875	Homeobox protein Dlx1a OS=Danio rerio OX=7955 GN=dlx1a PE=2 SV=1
P53774	Homeobox protein DLL-2 OS=Xenopus laevis OX=8355 GN=dll2 PE=2 SV=1
Q92988	Homeobox protein DLX-4 OS=Homo sapiens OX=9606 GN=DLX4 PE=1 SV=4

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050460	Family	Distal-less homeobox transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24327	HOMEOBOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan