Gene detail

Detailed information of evm.model.HiC_scaffold_30.49 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_30:501018...503511
NR annotation: CAA75669.1, prdl-b protein, partial [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q96QS3	Homeobox protein ARX OS=Homo sapiens OX=9606 GN=ARX PE=1 SV=1
O35085	Homeobox protein ARX OS=Mus musculus OX=10090 GN=Arx PE=1 SV=3
A6YP92	Homeobox protein ARX OS=Rattus norvegicus OX=10116 GN=Arx PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050649	Family	Paired Homeobox Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24329	HOMEOBOX PROTEIN ARISTALESS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan