Detailed information of evm.model.HiC_scaffold_309.18 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_309:334142...341213
NR annotation: XP_040215727.1, hemicentin-1 isoform X2 [Rana temporaria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P31836Neural cell adhesion molecule 1 OS=Bos taurus OX=9913 GN=NCAM1 PE=1 SV=1
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
P13591Neural cell adhesion molecule 1 OS=Homo sapiens OX=9606 GN=NCAM1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

TOP