Detailed information of evm.model.HiC_scaffold_309.5 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_309:109312...142513
NR annotation: XP_012556437.1, beta-galactosidase-1-like protein 2 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IW92Beta-galactosidase-1-like protein 2 OS=Homo sapiens OX=9606 GN=GLB1L2 PE=1 SV=1
Q3UPY5Beta-galactosidase-1-like protein 2 OS=Mus musculus OX=10090 GN=Glb1l2 PE=1 SV=1
Q5XIL5Beta-galactosidase-1-like protein 3 OS=Rattus norvegicus OX=10116 GN=Glb1l3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01301Glyco_hydro_35Glycosyl hydrolases family 35DomainInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR001944FamilyGlycoside hydrolase, family 35Interproscan
IPR019801Conserved_siteGlycoside hydrolase, family 35, conserved siteInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR031330DomainGlycoside hydrolase 35, catalytic domainInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23421BETA-GALACTOSIDASE RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0004565Molecular Functionbeta-galactosidase activityInterproscan
GO:0005773Cellular ComponentvacuoleInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan

TOP