Gene detail

Detailed information of evm.model.HiC_scaffold_31.415 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_31:5033017...5045454
NR annotation: XP_032232081.2, glucosidase 2 subunit beta isoform X3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O08795	Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=1 SV=1
P14314	Glucosidase 2 subunit beta OS=Homo sapiens OX=9606 GN=PRKCSH PE=1 SV=2
Q28034	Glucosidase 2 subunit beta OS=Bos taurus OX=9913 GN=PRKCSH PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12999	PRKCSH-like	Glucosidase II beta subunit-like	Family	Interproscan
PF13015	PRKCSH_1	Glucosidase II beta subunit-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009011	Homologous_superfamily	Mannose-6-phosphate receptor binding domain superfamily	Interproscan
IPR028146	Domain	Glucosidase II beta subunit, N-terminal	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR039794	Family	Glucosidase II beta subunit-like	Interproscan
IPR044865	Domain	MRH domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR036607	Domain	Glucosidase 2 subunit beta-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12630	N-LINKED OLIGOSACCHARIDE PROCESSING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006491	Biological Process	N-glycan processing	Interproscan
GO:0017177	Cellular Component	glucosidase II complex	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08288	PRKCSH; protein kinase C substrate 80K-H	-	Lectins	ko04091	deepkoala