Genomic Location: HiC_scaffold_31:876798...889915
NR annotation: XP_047124249.1, transcription factor SPT20 homolog isoform X1 [Hydra vulgaris]
| CDS | ||||
| evm.model.HiC_scaffold_31.45 | ||||
| Transcript |
| evm.model.HiC_scaffold_31.45 |
| Protein |
| evm.model.HiC_scaffold_31.45 |
| Uniprot term | Description |
|---|---|
| Q7TT00 | Transcription factor SPT20 homolog OS=Mus musculus OX=10090 GN=Supt20h PE=1 SV=1 |
| Q66HC7 | Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1 |
| Q5R724 | Transcription factor SPT20 homolog OS=Pongo abelii OX=9601 GN=SUPT20H PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12090 | Spt20_SEP | Spt20, SEP domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR046468 | Domain | Spt20-like, SEP domain | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR021950 | Family | Transcription factor Spt20 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13526 | TRANSCRIPTION FACTOR SPT20 HOMOLOG | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000124 | Cellular Component | SAGA complex | Interproscan |
| GO:0003712 | Molecular Function | transcription coregulator activity | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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