Detailed information of evm.model.HiC_scaffold_31.521 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_31:6423991...6453464
NR annotation: XP_031566645.1, nuclear pore complex protein Nup155-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75694Nuclear pore complex protein Nup155 OS=Homo sapiens OX=9606 GN=NUP155 PE=1 SV=1
Q99P88Nuclear pore complex protein Nup155 OS=Mus musculus OX=10090 GN=Nup155 PE=1 SV=1
P37199Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00928Adap_comp_subAdaptor complexes medium subunit familyFamilyInterproscan
PF03177Nucleoporin_CNon-repetitive/WGA-negative nucleoporin C-terminalFamilyInterproscan
PF01217Clat_adaptor_sClathrin adaptor complex small chainDomainInterproscan
PF08801Nucleoporin_NNup133 N terminal likeRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042538Homologous_superfamilyNucleoporin, Nup155-like, C-terminal, subdomain 3Interproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR028565DomainMu homology domainInterproscan
IPR004870FamilyNucleoporin, Nup155-likeInterproscan
IPR007187DomainNucleoporin, Nup133/Nup155-like, C-terminalInterproscan
IPR022775DomainAP complex, mu/sigma subunitInterproscan
IPR036168Homologous_superfamilyAP-2 complex subunit mu, C-terminal superfamilyInterproscan
IPR042533Homologous_superfamilyNucleoporin, Nup155-like, C-terminal, subdomain 1Interproscan
IPR001392FamilyClathrin adaptor, mu subunitInterproscan
IPR014908DomainNucleoporin, Nup133/Nup155-like, N-terminalInterproscan
IPR018240Conserved_siteClathrin adaptor, mu subunit, conserved siteInterproscan
IPR042537Homologous_superfamilyNucleoporin, Nup155-like, C-terminal, subdomain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000972Biological Processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0036228Biological Processprotein localization to nuclear inner membraneInterproscan
GO:0044611Cellular Componentnuclear pore inner ringInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030131Cellular Componentclathrin adaptor complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14312NUP155, NUP170, NUP157; nuclear pore complex protein Nup155-Messenger RNA biogenesisko03019deepkoala

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