Detailed information of evm.model.HiC_scaffold_31.55 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_31:992143...1031488
NR annotation: XP_019642503.1, PREDICTED: uncharacterized protein LOC109483812 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5RFQ3Periodic tryptophan protein 2 homolog OS=Pongo abelii OX=9601 GN=PWP2 PE=2 SV=1
Q15269Periodic tryptophan protein 2 homolog OS=Homo sapiens OX=9606 GN=PWP2 PE=1 SV=2
Q8BU03Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20906DUF917_CProtein of unknown function DUF917, C-terminalDomainInterproscan
PF06032DUF917Protein of unknown function (DUF917), N-terminalDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF05378Hydant_A_NHydantoinase/oxoprolinase N-terminal regionFamilyInterproscan
PF01968Hydantoinase_AHydantoinase/oxoprolinaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR048350DomainDUF917, C-terminal domainInterproscan
IPR024071Homologous_superfamilyDUF917, C-terminal domain superfamilyInterproscan
IPR027145FamilyPeriodic tryptophan protein 2Interproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR010318DomainDUF917, N-terminal domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR008040DomainHydantoinase/oxoprolinase, N-terminalInterproscan
IPR027479Homologous_superfamilyDUF917, N-terminal domain superfamilyInterproscan
IPR011048Homologous_superfamilyCytochrome cd1-nitrite reductase-like, haem d1 domain superfamilyInterproscan
IPR002821DomainHydantoinase A/oxoprolinaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19858WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034388Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan

TOP