Gene detail

Detailed information of evm.model.HiC_scaffold_31.560 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_31:6774380...6778350
NR annotation: XP_006819056.1, PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1-like [Saccoglossus kowalevskii]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8VDM6	Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1
Q9BUJ2	Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo sapiens OX=9606 GN=HNRNPUL1 PE=1 SV=2
Q9VNV3	ATP-dependent RNA helicase Ddx1 OS=Drosophila melanogaster OX=7227 GN=Ddx1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00622	SPRY	SPRY domain	Family	Interproscan
PF13671	AAA_33	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003877	Domain	SPRY domain	Interproscan
IPR001870	Domain	B30.2/SPRY domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR043136	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR035778	Domain	Heterogeneous nuclear ribonucleoprotein U, SPRY domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12381	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan