Detailed information of evm.model.HiC_scaffold_31.652 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_31:7599456...7610789
NR annotation: XP_029191351.2, histidine--tRNA ligase, cytoplasmic-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9QI36Histidine--tRNA ligase OS=Danio rerio OX=7955 GN=hars PE=3 SV=2
Q61035Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2
Q2KI84Histidine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=HARS1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13393tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000738DomainWHEP-TRS domainInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR041715DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR009068Homologous_superfamilyuS15/NS1, RNA-binding domain superfamilyInterproscan
IPR004516FamilyHistidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11476HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004821Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006427Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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