Gene detail

Detailed information of evm.model.HiC_scaffold_315.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_315:10424...23749
NR annotation: XP_044171434.1, uncharacterized protein LOC114950689 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_315.1

AGATTTCCTGAAAAAGTAAAAGAGCCAGGTACTTACCACCATGACTGGCTCATTGAAGACCCACCTGGATTTGAATCTAAGTTCATTGACAAAGAAATAGGATTTGGTGTGTTTGTAACCAGGAAATTCAAAAAAGGGGATTTTCTGCTGCATTATGCAGGAGACCTGCTCACGAACGATGAAGCCAAGAAGATTGAGAAAAAATATGCGAAGGAAGAAAAAGGGAGCTTTATGTATTATTTCCTCCATGATGGCATTCAATATTGTATTGATGCAACAGAAGATAATGGTAGCCTGGGAAGGCTTGTAAATGACTCAGAGAAGCCAAACTGTGTCATGAAAAAGATGTCAGCACATGACCTTCCTTGTCTTTGCCTCTTCGCATTAAAGGAACTTGAGCCGGGGACAGAACTCCGGTACGACTATGGTGTCAAAGATCTTCCTTGGAGAGTTAAGATAAATCTTGATTGTAGGAAACTTGTAGCAGGCCAGAGTCGCCAATCATCCCATACAAGTTCAGAAGAAAGAGCATTAAAAAGgacattttatgattctttgagtctttccttcttatttctatcatttaatgcaataattgaagttacatacattatgaggacattttatgattctttgagtctttccttcttatttctatcatttaatgcaataattgaagttacacacattatgaggacattttatgattctttgagtctttccttcttatttctatcatttaatgcaataattgaacttacatacattatgaggacattttatgattctttgagtctttcattcttatttctatcatttaacgcaataattgaacttacatacattatgaggacattttatgattctttgagtctttcattcttatttctatcatttaatgcaataattgaacttacatacattatgaggacattttatgattctttgagtctttcCTTGCACAATGACTCTGGAATTCATGGAGAATTTCCAGAAATCGACGATACAGACGATGATAGCGATGAAACTTTGTCAAGTTCAGCAGAGTCATCATCTTCTAATAGTTCAAATGAGGAGGACGGAATATTTTCCCAAACtccaagaaaattaaaaaaggcCAAGAAAACTGTGAAAGAAATGTCACCAACAGAAACAGcacaaacaacaacagcaacagcaactgcCTCGCTGGAACAGATGTCCGTTGAGAATGTACTTTCAAAGCCATTGAATGAGAAAGAATCCCTTCCATCAACTGGAGGATCATTTTCCAAACCAATTGTTACTGTCCCATTGGCAAAGAAAAATGAGCATGGCTCGAGAGTTTATGACAAGACCCATGCATGCTACTTTTGCGGCAACCAGTCCTTGAAAATTGCACGGCATCTTCTTTCAGTACACAAAAATGAATCTGAAGTGCTGAAAATTACCTCAATCAATGACAAGACTCCTGAGGGAAAAAAGCGGAGGCAGCTCGAGTTGGAACGTTTGAGATTGAAAGgagatttttatttcaatttaacGGTTCTTAAATGTGGCGGTGAGCTCAAAATTTTGCGGCGTCCTGCTTCTGAAGAATCAACCGATTATCGCCAATTCGTCCCATGTGTTCACTGTTTGGGATTCGTGCAGAGATACGACCTTTGGAGACATGTTGGGCAGTGTCctttcaatgttttaaaacagcaacaagaaaaacATCCGAACAGAAAGCTTCAGCACGAAAGTGAAATGCTACTTTGTGGAAGTACTGAAGGTTGTAGCTCAGCTATGGAAAGTTCAGTAATTGCCATGATGCGACAAGACAAGATTAGTTTCACTGCTAAGAGAGATGAGCTAATAATGCTTTTTGGCAATTCATGGTTTGAAAAATGCGGGTCAGGCAAGTCAAATTACATTTCCGAAAAAATGAGATCCATCTCTCGTCTTTTATTAAAAGTCAGAGAACAGCCAGGAAAGGAAAATGTCGACTTGGCAGACATTTTGTCaccagaaatgtttgacaatgtagTTGCTGCTACAAGATCACTGTGCAATTTTCACCAAATTGAAGAGAATGATCATTTGGCCTCTTTTGATAAGCCAGGTCTTGCCCTTAAACTAGGGCACTCGCTGAAGCGTTGCTCAGAGCTGCTGAGAGGAGTTGCCTTAAAGAAAAGGGATAAAGCCCTAAAGGATGATGTCGAAGCTTTTATCGACCTGCTTAATTCTGAATGGTCTACAAAGGTTTCAACAGCAGCTTTAAGAGCTTTAGCAGATAACTCATTCAAGAAGACACCTGACCTACCAAGAACTGACGATTTGGTCACGCTTAGAGACTTTCTTCTAGCTGAAATTCCAAAAACCGCAGACAAGCTGTCGCTGAATACTGACCTTCCCACCTGGAGATATTTGGCAGAACTAACAGTGGCAAGAATTGTACTTTTCAACAAAAGGAGAGAAAGCGAGGGTCGAAAATGCAAATCAGCCAGTTTGAAAGTCGACCAATTGGAACGAAATTAG

Transcript

evm.model.HiC_scaffold_315.1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00856	SET	SET domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001214	Domain	SET domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33480	SET DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan