Detailed information of evm.model.HiC_scaffold_32.315 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:4267880...4323177
NR annotation: XP_031570800.1, mucin-2-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P80012von Willebrand factor (Fragment) OS=Bos taurus OX=9913 GN=VWF PE=1 SV=2
P04275von Willebrand factor OS=Homo sapiens OX=9606 GN=VWF PE=1 SV=4
Q8CIZ8von Willebrand factor OS=Mus musculus OX=10090 GN=Vwf PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF08742C8C8 domainDomainInterproscan
PF01826TILTrypsin Inhibitor like cysteine rich domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00093VWCvon Willebrand factor type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR001007DomainVWFC domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR036084Homologous_superfamilySerine protease inhibitor-like superfamilyInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR006207DomainCystine knot, C-terminalInterproscan
IPR014853DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR002919DomainTrypsin Inhibitor-like, cysteine rich domainInterproscan
IPR050780FamilyMucin/von Willebrand/Thrombospondin superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11339EXTRACELLULAR MATRIX GLYCOPROTEIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

TOP