Detailed information of evm.model.HiC_scaffold_32.362 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:4938603...4946957
NR annotation: CAB3977829.1, AP-1 complex subunit beta-1-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35643AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2
P63009AP-2 complex subunit beta OS=Bos taurus OX=9913 GN=AP2B1 PE=1 SV=2
P63010AP-2 complex subunit beta OS=Homo sapiens OX=9606 GN=AP2B1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01602Adaptin_NAdaptin N terminal regionRepeatInterproscan
PF09066B2-adapt-app_CBeta2-adaptin appendage, C-terminal sub-domainDomainInterproscan
PF02883Alpha_adaptinC2Adaptin C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR008152DomainClathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainInterproscan
IPR026739FamilyAP complex subunit betaInterproscan
IPR015151DomainBeta-adaptin appendage, C-terminal subdomainInterproscan
IPR002553DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR009028Homologous_superfamilyCoatomer/calthrin adaptor appendage, C-terminal subdomainInterproscan
IPR013041Homologous_superfamilyClathrin adaptor, appendage, Ig-like subdomain superfamilyInterproscan
IPR012295Homologous_superfamilyTBP domain superfamilyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR013037Homologous_superfamilyClathrin adaptor, beta-adaptin, appendage, Ig-like subdomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11134ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030131Cellular Componentclathrin adaptor complexInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan

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