Detailed information of evm.model.HiC_scaffold_32.392 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:5272160...5290277
NR annotation: XP_020609798.1, vacuolar protein sorting-associated protein 53 homolog isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZLD7Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus OX=9031 GN=VPS53 PE=2 SV=1
Q5R5J4Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii OX=9601 GN=VPS53 PE=2 SV=2
Q5VIR6Vacuolar protein sorting-associated protein 53 homolog OS=Homo sapiens OX=9606 GN=VPS53 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04100Vps53_NVps53, N-terminal RepeatInterproscan
PF16854VPS53_CVacuolar protein sorting-associated protein 53 C-terminusRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039766FamilyVacuolar protein sorting-associated protein 53Interproscan
IPR000742DomainEGF-like domainInterproscan
IPR038260Homologous_superfamilyVps53, C-terminal domain superfamilyInterproscan
IPR007234DomainVps53, N-terminalInterproscan
IPR031745DomainVps53, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12820VACUOLAR SORTING PROTEIN 53Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan

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