Gene detail

Detailed information of evm.model.HiC_scaffold_32.394 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:5298368...5301219
NR annotation: KAJ8307587.1, hypothetical protein KUTeg_014863, partial [Tegillarca granosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_32.394

atgaatcagtataaatgtgatcattgtgaattctcttccaagtttaaaagtaatgttaagcgacatgaagaagagatgcatgaggagagtagtgaagagtctgactcagatgatgagatagaagctgaaagtgaccatgatgatgatgaaactgtcaacactgaggaggatcttcctttagggaatgtatggccttcaatgcAAACTTTGGACTTCAACGACTCCCACTCAAGTAGGAATATATATACCGACACGAACAACAAGTCATTGACTTCGAAGGACGTGGAAACATTAATTCTTGCTGAAATAGATAGCATTATAGGCGGAAAAAAACGACCAGATTTTGAAACAGTGGTCAAGAACTTAGAGAAGAAGCATGGCCTAGCTAGGTCAGTTGCCTCGTCGGAACTAAATTTTCTTCTATCAACTGGAACTTTGGAAAACAAGCTGTTTAAGGGGAAGCATTCACTGCGTCTGGCAAAGAATTGTGATTTAGATGGAACGAAAAGCGTACAGAGTAGGAAAATATCAGAAGATGAGGATAGACTCGCTGAATGCAGAGAAGAATTACAGAAAATGGCGGAAACTCAGAAAAGGAGCGATAACCTCTTGGAAGTTTCTGGTCAAAATCAGAACGaagacaaattttcaaatgtagaaatggatgaagaagaagacgcTGATGATGCAAAGCAGAATAAAAAGGTAAATAATTTAGCTCAGTTCCCCCAGGACTCAAACACAAACGAGAAATCAGCAGATCATCGTTTGACCATGCTTGAGCGAAAATTCGAACAGCTAAGTATGCTTCTTGTGTCAGAACAACCGACGAAATCTTCTATTGATAAAACTGCGAAGAGAATTCATGAactagaaaatgaaaatagaataCTTCTGGATGAAAATATGgctttaaaaattgaaaatgccgACTTAAAAGGTTTTATCCGTGGAAAGGTGGACAGCATAGAAAACGACGTTAAATTTTTatgcaaagaaaattcaaaaaaaaatcatgaaaaacagaaaattaaaaatctttcAGTTGATCGAAATACAGTGGACATGGAGGATGATATCTTGTGTCAGGATTTCTCGGGCGATGATCTGCAAAACAATCATGCAATGTTTCAAGGCCTGACATATGATAAGCAAAGAAGTGTCAGTTCAGCCCCTTGGGAACTCCCGAAAAATCCATCACGCTTATCTCAACCTATTAAGTCAAGTGTTGAAACGAGAAATAGATTTGATGCTTTGAGAGACGATCCCCTGGACGAATTTCGCTCAAATCCAACATGGGACTCTGTGTTGATCCCCAGCAGAGATCGAagacaagaaagacaaaaaggagcaattcccaaaaaaatgGTCGAAGACATGTTCTCATATGTAGAACCCACGATGAAGATGAATCCTGACAGAATAATTTTAATGTGTGGCACCAATAATTTAAGAGATGATCAGCCAGAAATAGTCGTAAACAAGCTAATTAGCCTAGCAATAAAAGTATCCGAAAAAGCAAGTGGAGTGGCAGTATCAGGAATTGTATATCGAGGAGACTCACAAGCTCTGGAAACGAAAAGAAGATTGGTCAACAGGTTAGTCGAAAACAGTCTGAAAACTTATGGAATTGAATTTATTGATCATGATAACTTAACGGGAAAACACTTAGATAAATGGAGTCTAAGGAACAAGATAGTCGATCTTAGGATCTTTATCCAGAAATTGCAACCTGATTTTTTCGTGGTACAAGAGACTAAGCTTGATAGTTCAtttaaaacaaataattttcTCTTAAACGATTATCAAAAACCTCAGCGTTTAGATAGAAATGCCCATGGAGGGGGACTGATGGCCTATGCAAGAAAAGGCTTAGTCTGTAATAGGAAGGCATGCTTTGAATCCCCTGAACTTGAAATGATTTGCTCAGAACTAGtaataaacaaaaagaaatggattATTTTCTCCCTGTACCGTCCTCCAGTCTCCACAAATTTAGTCCCTATTTTTGACAAGCTCCTCGAGCAATTGAATATCGTTCTCGACAATTATGATAATCTTATTATTTTGGGAGATTTAAATATAGATACCATGAATATAAATGACCCTGGTTACAATAAATTACTTCTACTTATGGATATATTTAATTTGACAAACTTAGTTAAGGTAAAAACGTGCTTTGCAACTCCTCTCGGAACATCTATTGATGTTATACTGACGAATCGGCCCTCATGTTTCCAAAAGACAACAGCCTTTGAAACCGGCATAAGCGACCATCATAGTCTTGTTTTTACTCAAATGAAGGCTAAAGCACCTCGTCTGAAGAGAAAGTGCATCAAATATCGTTCATATAAAACTTTCGATGAACTAAAATTCCGCGAAGATATAAAGAGTGCTGTTTTGTGTATCAATTTTGAGGACCCCAATTCGGCTTATGAGAAACTAACTGATACTATAAGAAATATTGTAAATACACATGCTCCCTCAAGACTAGATTTCTAA

Transcript

evm.model.HiC_scaffold_32.394

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR020847	Binding_site	AP endonuclease 1, binding site	Interproscan
IPR036514	Homologous_superfamily	SGNH hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004519	Molecular Function	endonuclease activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan