Detailed information of evm.model.HiC_scaffold_32.477 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:6310496...6337689
NR annotation: XP_020894591.1, E3 ubiquitin-protein ligase DTX4 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q86UW9Probable E3 ubiquitin-protein ligase DTX2 OS=Homo sapiens OX=9606 GN=DTX2 PE=1 SV=3
Q9CQG2RNA N(6)-adenosine-methyltransferase METTL16 OS=Mus musculus OX=10090 GN=Mettl16 PE=1 SV=1
Q86W50RNA N(6)-adenosine-methyltransferase METTL16 OS=Homo sapiens OX=9606 GN=METTL16 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05971Methyltransf_10RNA methyltransferaseFamilyInterproscan
PF02825WWEWWE domainFamilyInterproscan
PF18102DTCDeltex C-terminal domainDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004170DomainWWE domainInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR010286FamilyMETTL16/RlmF familyInterproscan
IPR039396DomainDeltex, C-terminalInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR039399Homologous_superfamilyDeltex, C-terminal domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13393SAM-DEPENDENT METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0052907Molecular Function23S rRNA (adenine(1618)-N(6))-methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP