Detailed information of evm.model.HiC_scaffold_32.621 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:7909844...7946814
NR annotation: XP_022800561.1, DNA excision repair protein ERCC-6-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2BGR3DNA excision repair protein ERCC-6-like OS=Danio rerio OX=7955 GN=ercc6l PE=1 SV=1
Q2NKX8DNA excision repair protein ERCC-6-like OS=Homo sapiens OX=9606 GN=ERCC6L PE=1 SV=1
A6QQR4DNA excision repair protein ERCC-6-like OS=Bos taurus OX=9913 GN=ERCC6L PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR050940FamilyActin-regulating Serine/Threonine KinaseInterproscan
IPR001478DomainPDZ domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46485LIM DOMAIN KINASE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

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