Gene detail

Detailed information of evm.model.HiC_scaffold_32.63 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:836535...845116
NR annotation: PIK51657.1, putative L-serine dehydratase/L-threonine deaminase isoform X1 [Apostichopus japonicus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8R238	Serine dehydratase-like OS=Mus musculus OX=10090 GN=Sdsl PE=1 SV=1
Q8VBT2	L-serine dehydratase/L-threonine deaminase OS=Mus musculus OX=10090 GN=Sds PE=1 SV=3
A0A6N3IN21	Serine dehydratase-like OS=Rattus norvegicus OX=10116 GN=Sdsl PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036052	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR001926	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan
IPR050147	Family	Serine/Threonine Dehydratase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48078	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003941	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0004794	Molecular Function	threonine deaminase activity	Interproscan
GO:0006565	Biological Process	L-serine catabolic process	Interproscan
GO:0006567	Biological Process	threonine catabolic process	Interproscan
GO:0009097	Biological Process	isoleucine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17989	SDS, SDH, CHA1; L-serine/L-threonine ammonia-lyase	EC:4.3.1.17 EC:4.3.1.19	Valine, leucine and isoleucine biosynthesis	ko00290	deepkoala