Detailed information of evm.model.HiC_scaffold_32.656 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:8185923...8214042
NR annotation: XP_047142238.1, polycystic kidney disease and receptor for egg jelly-related protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZU90Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio OX=7955 GN=chd1l PE=2 SV=1
Q3B7N1Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1
Q86WJ1Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF01822WSCWSC domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF16759LIG3_BRCTDNA ligase 3 BRCT domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR002589DomainMacro domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000601DomainPKD domainInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR042060DomainPolycystin-1 like, PLAT/LH2 domainInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR031053FamilyChromodomain-helicase-DNA-binding protein 1-likeInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR031916DomainDNA ligase 3, BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47157CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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