Detailed information of evm.model.HiC_scaffold_32.683 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:8947140...8955338
NR annotation: XP_020912643.1, reticulon-1-A [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99P72Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2
Q9JK11Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1
Q9NQC3Reticulon-4 OS=Homo sapiens OX=9606 GN=RTN4 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyFork_head

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00250ForkheadForkhead domainDomainInterproscan
PF02453ReticulonReticulonFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR003388DomainReticulonInterproscan
IPR046964FamilyReticulon 1-4Interproscan
IPR001766DomainFork head domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR047519DomainForkhead box protein Q2-like, forkhead domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45799RETICULON-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

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