Detailed information of evm.model.HiC_scaffold_32.692 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:9128269...9143693
NR annotation: XP_031566791.1, DNA helicase MCM9-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1QDI9DNA helicase MCM9 OS=Danio rerio OX=7955 GN=mcm9 PE=3 SV=2
I0IUP4DNA helicase MCM9 OS=Gallus gallus OX=9031 GN=MCM9 PE=1 SV=2
F6RIX4DNA helicase MCM9 OS=Xenopus tropicalis OX=8364 GN=mcm9 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00493MCMMCM P-loop domainDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF01186Lysyl_oxidaseLysyl oxidase FamilyInterproscan
PF17207MCM_OBMCM OB domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR001208DomainMCM domainInterproscan
IPR001695FamilyLysyl oxidaseInterproscan
IPR050912FamilyLysyl oxidase-like proteinInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR031327FamilyMini-chromosome maintenance proteinInterproscan
IPR001190DomainSRCR domainInterproscan
IPR033762DomainMCM OB domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR019828Conserved_siteLysyl oxidase, conserved siteInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45817LYSYL OXIDASE-LIKE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0016641Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptorInterproscan
GO:0004720Molecular Functionprotein-lysine 6-oxidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0018057Biological Processpeptidyl-lysine oxidationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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