Gene detail

Detailed information of evm.model.HiC_scaffold_32.739 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:9741565...9808918
NR annotation: XP_033634410.1, AP-5 complex subunit mu-1-like [Asterias rubens]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_32.739

ATGAGTATTTGTGCTCTTTGGATTATTTCTCTTGCCGAGAAACGACAAAGAAGTGTCTTATTTTCGAAGCATTATCCAACTGTAAAGAAGCGAGCAAGAAAATCCAATTCTCTGCACTGTGCATTATTACCAGACAATGAACAAGTATCAGAATCTATTATAACAGAAATGCAAGTGAAAAGAACAAGTGAAGAGTTTATAAAAGAATATGATTCCTGCACAATGCAAAGAAATCCACCTATTTACTCGATACTAGAAAGTAAAGTTTGGCCAATCATAGCTATTGTTAAGCATGGTCTTGTTTTTGCCTGTCTCCCATATGTTGAGCATTCACAAGAAGAATTATTCAAAATGAACTACAAAACTTTAGGTCCCATCGCAGTTGCCTACTCTATGATGCACAAAATTGCTGATTTGATTGGACCGATTCAGCCTGGCTTAGAGGTTTCAGAAGAGAAAATCCAAGATCTTCGCGACTATCTTCTTGTTTGTATGCCATTTGGAACACCACTGGAAATGGATCCAGCTACTTCACGAGGAATACTGAATTCTAAAGACTCATTATTTGTACCAAAGCAAAAGGTTCCTTCTTGGCGACCGAACACTTTCAAAGGAAAACAACATATAGCCATTTTTATTCACGAGCAACTTCGATGTGTTCAGtaTGACAGATCTAGTATGCCAGACGTGTGCGAGGTATTTGGAACCATCAGCTGCAAAgcCGAGCTAGAAGGATCGCCAGAAGTGTCCTTGGATCTTCTTGCAACAAATGATTCAACCGTCTTTGACAATATGATCTGTCATTATTGTGTTCAGCAATCTGACAGTCTTACCCCCACTATAACTGcagaagataaaacattttcaaatccaTGTGGTGTGAGATCTTTACGATTCTGTCCACCTATTGACAGTTTTGTATTATGTCAATACAAACTAACGTCTGCAGCAGATTGCTTACCTATTATGGCGTATTACCAAATGAAGATTGATGGCAACAAAGCACAATTCAAAATTCAGTTGAATCTatggaaaacaatgaaaaataactTTGAATACTTGCATGTAATGATACCTTTCTTTAACAGAACACCAATTACAAAATTTGAATGCACACCAACATCGCATAATGTAGTTCTACTAAAAGACCTCAGAACACTTCGTTGGAACATAGGTTCGAAATTCCCAAGCAAAACATTGGACCTATCTCTAGAAGGACGAGTCTGGTTTTCAGAGAAAGGAGAGGCTGTCACCATGGCAGATAGTTTCTGTGTTGGACCCAACTCTTACATACTGATATCGTTCAAAGTTGCCGATTATACATATAGTGGTTTGAGACTGGATAATAGATCAATAAGCCtggattcaaattcaaaatttaaagttACTGCAGGTGCCGAATTCTTAGCAACTGAGTTCAGAGTATGGAATTCACTTGGTGATGCCATTGGATATGGTATGAATGATAATACAAGAATGAGTTCCAATAAATATTTGCTGctgaaaaatgatgaaaaaccGTGCAAAAAGGCACTTCTTGACAGATACTTGGAAGAACAAGAAATATacaatgattgtgatgataatttGTACCGTGAAGAGAACAATAATTTTGCAGAAGATGATGACACAATTATTTCAAGAAAGAAAATCATGATTCAAGTTAACGATGCAGAGCCTGAGgaagattttgattttgtaTCAACGGAAGATAATATAAACAATAATACGAGAATCTTAAATCGTAGAAATGCTCATGCTAAGGGAAGATTGACAAACAAATTAACAATTGCGCATTCCAGTATTTCCAAAAGCCTTGACGAGACTCAGTTTACTAACATTGGTCTACAAATCCCAAATGATGTTAGTTCTCAAAAGTCACAAAATACATACAGTGGAAATGGTGCTTCTGAATCTTACGATGTGGACAGGTTATCGACATTAAGACCAGCATCTTATCGGAAATTCTCGGGTAGCAATGACAGCTATGTCACAAAGCCTCGCAGACCTCGTTCATCGAGACCTAGCAGCAACCATCAGCAAATTGGTGACCGAAATCATGGAAAGCAGACAATTCGTAAGATCTCGCTTCCAAGTCCAGGAACTAAAGAACTTGTCAATGGGGTAAAATACCACTTGGAGCTTGAAGACGATGCATTTCGGCGTGTTTCAAAGAAAACTAAATCTTCAACTTCGTTAGCTTGTTTTTCAGAATCCCTAAAAGCAATTAGATCATGCTCTTCACTGAGCACACGTAGATATAGCACTGCATCAAATTTGAGTACCTCCAGCAGCTTTGCTGAGCTCAGTGACTTAGAATGCCAGAGTCTTGCAAGCTCCACGTCTTCGATTGCATCTTGTCGCTTACCACCTATAAAGAATCTTACAAGTAATCCAAACAAGTAA

Transcript

evm.model.HiC_scaffold_32.739

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00928	Adap_comp_sub	Adaptor complexes medium subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036168	Homologous_superfamily	AP-2 complex subunit mu, C-terminal superfamily	Interproscan
IPR028565	Domain	Mu homology domain	Interproscan
IPR039591	Family	AP-5 complex subunit mu-1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16082	AP-5 COMPLEX SUBUNIT MU-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005764	Cellular Component	lysosome	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016197	Biological Process	endosomal transport	Interproscan
GO:0030119	Cellular Component	AP-type membrane coat adaptor complex	Interproscan