Genomic Location: HiC_scaffold_330:85284...89022
NR annotation: XP_012556680.1, uncharacterized protein LOC105844518 [Hydra vulgaris]
| CDS |
| evm.model.HiC_scaffold_330.3 |
| Transcript |
| evm.model.HiC_scaffold_330.3 |
| Protein |
| evm.model.HiC_scaffold_330.3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF05699 | Dimer_Tnp_hAT | hAT family C-terminal dimerisation region | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR008906 | Domain | HAT, C-terminal dimerisation domain | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0030020 | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
