Gene detail

Detailed information of evm.model.HiC_scaffold_34.121 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_34:1484416...1522301
NR annotation: CAB3977583.1, Transposable element Tcb1 transposase [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A2BIR6	Carbohydrate deacetylase OS=Danio rerio OX=7955 GN=ydjc PE=3 SV=1
Q6DJC2	Carbohydrate deacetylase OS=Xenopus tropicalis OX=8364 GN=ydjc PE=2 SV=1
Q569M2	Carbohydrate deacetylase OS=Xenopus laevis OX=8355 GN=ydjc PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF04794	YdjC	YdjC-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR011330	Homologous_superfamily	Glycoside hydrolase/deacetylase, beta/alpha-barrel	Interproscan
IPR006879	Family	Carbohydrate deacetylase YdjC-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31609	YDJC DEACETYLASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0019213	Molecular Function	deacetylase activity	Interproscan