Detailed information of evm.model.HiC_scaffold_34.18 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_34:201103...217128
NR annotation: XP_028411787.1, potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O88703Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 OS=Mus musculus OX=10090 GN=Hcn2 PE=1 SV=1
Q9Y3Q4Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 OS=Homo sapiens OX=9606 GN=HCN4 PE=1 SV=1
Q9JKA9Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 OS=Rattus norvegicus OX=10116 GN=Hcn2 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08412Ion_trans_NIon transport protein N-terminalFamilyInterproscan
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00027cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR051413FamilyPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channelInterproscan
IPR013621DomainIon transport N-terminalInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005821DomainIon transport domainInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR018488Conserved_siteCyclic nucleotide-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45689I[[H]] CHANNEL, ISOFORM EInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003254Biological Processregulation of membrane depolarizationInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0098855Cellular ComponentHCN channel complexInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

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