Genomic Location: HiC_scaffold_348:73814...88894
NR annotation: XP_022791036.1, TALPID3 protein-like [Stylophora pistillata]
| CDS | |||||
| evm.model.HiC_scaffold_348.9 | |||||
| Transcript |
| evm.model.HiC_scaffold_348.9 |
| Protein |
| evm.model.HiC_scaffold_348.9 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q1G7G9 | TALPID3 protein OS=Gallus gallus OX=9031 GN=TALPID3 PE=2 SV=2 | ||||
| Q9BVV6 | Protein TALPID3 OS=Homo sapiens OX=9606 GN=KIAA0586 PE=1 SV=4 | ||||
| H6D7E6 | Protein TALPID3 OS=Danio rerio OX=7955 GN=talpid3 PE=2 SV=1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-C2H2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| PF15324 | TALPID3 | Hedgehog signalling target | Family | Interproscan |
| PF13912 | zf-C2H2_6 | C2H2-type zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR029246 | Family | Protein TALPID3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24390 | ZINC FINGER PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0007224 | Biological Process | smoothened signaling pathway | Interproscan |
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K09228 | KRAB; KRAB domain-containing zinc finger protein | - | Transcription factors | ko03000 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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