Gene detail

Detailed information of evm.model.HiC_scaffold_365.44 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_365:5711...9166
NR annotation: CAB4006553.1, tigger transposable element-derived 6-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P26652	Metalloproteinase inhibitor 3 OS=Gallus gallus OX=9031 GN=TIMP3 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	HTH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05225	HTH_psq	helix-turn-helix, Psq domain	Domain	Interproscan
PF00965	TIMP	Tissue inhibitor of metalloproteinase	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008993	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan
IPR027465	Homologous_superfamily	Proteinase inhibitor I35b (TIMP), C-terminal	Interproscan
IPR001820	Family	Protease inhibitor I35 (TIMP)	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0008191	Molecular Function	metalloendopeptidase inhibitor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan