Gene detail

Detailed information of evm.model.HiC_scaffold_37.328 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_37:2182263...2199044
NR annotation: XP_004208576.1, alpha-actinin [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
L7UZ85	Alpha-actinin OS=Dermatophagoides farinae OX=6954 PE=1 SV=1
Q7PKQ5	Alpha-actinin, sarcomeric OS=Anopheles gambiae OX=7165 GN=Actn PE=3 SV=2
P05094	Alpha-actinin-1 OS=Gallus gallus OX=9031 GN=ACTN1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00435	Spectrin	Spectrin repeat	Domain	Interproscan
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002017	Repeat	Spectrin repeat	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR001589	Conserved_site	Actinin-type actin-binding domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11915	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0030018	Cellular Component	Z disc	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0030054	Cellular Component	cell junction	Interproscan
GO:0030864	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0042995	Cellular Component	cell projection	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0055001	Biological Process	muscle cell development	Interproscan