Gene detail

Detailed information of evm.model.contig_11642.3 in Platygyra sinensis

Genomic Location: contig_11642:8550...8902
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14360 all species →	PAP2_C	PAP2 superfamily C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045221 all species →	Family	Sphingomyelin synthase-like	Interproscan
IPR025749 all species →	Domain	Sphingomyelin synthase-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21290 all species →	SPHINGOMYELIN SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016780 all species →	Molecular Function	phosphotransferase activity, for other substituted phosphate groups	Interproscan
GO:0030173 all species →	Cellular Component	obsolete integral component of Golgi membrane	Interproscan
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0033188 all species →	Molecular Function	sphingomyelin synthase activity	Interproscan
GO:0046513 all species →	Biological Process	ceramide biosynthetic process	Interproscan
GO:0047493 all species →	Molecular Function	ceramide cholinephosphotransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_11642.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.