Gene detail

Detailed information of evm.model.contig_11720.5 in Platygyra sinensis

Genomic Location: contig_11720:37189...51636
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_11720.5

ATGTCTTCGCGAGTTGCTTCGAAAACGACTGTTGTACCGCCAGTCATAAGCACTTTGGGTACACCACAACTGATGTTTCTACGAAAAGCAGACCGCACAACAGATCCATCTTTGATGAGAAAAATGCCTCCATTGAACACGTGCCAAAGAGTTCGCTCAGAGTTATATAAAATGCAAGAGAGTGCATCGGATGAAGTTCAACAACAGTGCAAGCCAGTTGTGAGATGGCAGAACTTTGGCACGTTTTCCAGGGATGACATTGCTTATTTCATACAGCAGTACCAACTTAAGGCCACAAAAAAGGATGTGCAAGATGAAGAAGCGTGGTTTGATCAACTATTAACCCTGTACTCTTCAAAAGCAAGCAGATCATTCGTATCTAATGTGAGAAGTTTTATGGAACACATTTGGATGTCTTCGCCAGATTCTACTGTGTTATCCAGCGGAATTACAGCAGAACAGCTAATTTGCACTGAAGCATTCATCCACTCAGAGCGAGCTAAAGAGCGACTGTGTAGTACTATTACTAACAAACTACCGCAGTTGAAATACATTCATTTTGCCCTAAATGTAAAACGAATGAATTATGGAAAGGTTTTGGTGGGAAATGGATATCATTGGACCTACTTCGTTTTTAGTACTTCACTCGATGAACTCTATTATGGTGATAGTCTTGGTTGGAAGTTACCTTCAAATCTTCTTACAGTTATGAAACCAGTGTTTGAAGCACTTAACACGTTCAGTGGAAAATCCTACACCAAACCTCCTTATCCCGTCCTTATGCATCAACCAGGGGTAGCACACGTTGAGCAGCACGAATGTGGTAGTTCTTGCTTCAAAGCTTTTCCACTTCAGACATGTGGTTTCGCATGTGGTTTGACACCTGTTTTCATGGCGGCAATAGCTGGAAGCAGAGAAGAACTGTGGAAGCACATGATTAGAGAAAGAAATCCTAATCAAAACGTATTGATAGATCGGATAGTAACAGCGAGCCCGTCAGGTGCTAGCAAAACAAGTCCGTCAGCTACTTACACAGCGAGTCTTTCAGCCACTAGGAAAATAAGTCCATCAGGCAATAGTGAAACAATTCCGTCAGCTGCAAGTAAAGCAAGTCCGTCAGCCACAAGCAAAGCAAGTCCGTCAGCTGCTAGTAAAGCAAGTCCGTCAGGCACTAGCAAAGCAAGTCCATCAGCTGCTAGCAAAGCAAGTCCGTCGGCTGCCAGTAAAGCAAGTCCATCAGTCACTAGCAAAGCAAGTCCGTCAGGCACTAACAAGGCGAGTCCATCAGCTGCCAGTGAAGCAAGTCCATCAGCCACTAGCAAAGCAAGTCCATCAGGCACTAACAAGGCGAGTCCATCAGCTGCCAGTGAAGCAAGTCCATCAGCCACTAGCAAAGCAAGTCCATCAGGCACTAGCAAGGCGAGTCCATCAGCTGCCAGTGAAGCAAGTCCATCAGCCACTAGCAAAGCAAGTCCATCAGCTGCTAGCAAAGCAAGTCCATCAGCCACTAGCAAGGGAAGTCCATCAGCTGCCAGTAAAGCAAGTCCATCAGCTGCCAGCAAAGCAAGTCCGTCAGCTGCCAGTAAAGCAAGTCCATCAGTCACTAGCAAACCAAGTCCGTCAGGCACTAGCAAAGCAAGTCTGTCAGCTGCCAATAAAGCAAGTCCATCAGTCACTAGCAAAGCAAGTCCGTCAGCCACTAGCAAAGCAAGTCCGTCAGCTACTAGCAAAGCAAGTCTGTCAGCTGCTAGCAAAGCAAGTCCGTCAGGCACTAGCAAACTAACTCCATCAACTGCCAGTAAAGCATGTCCGTCAAGCACTAGCAAGGCAAGTCCGTCAGTCACTAGTAAAGAAAGTCCGTTACCCGCTAGTAAAGCAAGTCCGTCAGCCACAAGCAAGGCAAGTCCTGGCAGTAAAGCAGCTACTAGTAAAGCAAGGCCGTCACCCGCTAGTGAAGCAAGTCCGTTACCCGCTAGTAAAGCAAGTCCGTCAGCTGCTAGTAAAGCAAGTCCGTCAGCTGCTAGTAACGCAAGTCCGTCAGCCACAAGCAAAGCAAGTCTGTCAGCTGCTAGCAAAGCAACTCCATTAAACACTGGCAAAGCGAGTCCGTCACCCACTAGTAAGGCAAGTCCGTCAACTGCTAGTCAAGCAAGTCCATCAGGCACTAGCTCAGTGAGTCCGCCAGGAACTTGCACAGCAAGAACACCAGCAACTAGCAAAGCAAGTCCGTCAAGCGCTAACACAGCAAGTCCATCAGGCACTAGCACAGCAAAATGTACAGAAAGTCCCTCCGTCTCTTTATCTGGCGATAAGCTACTTCCATTTCCCGGCGTTTCTAAAAGCTTTTACAAGCAGCAAGGAGAAAATTGGGCTAAAAATAATTCGCGCAATTTAAAGCGAACGGAAACAATTTGTATCAAGAAAAACCGCGAAACCATAGGCAAGTGCAAAGAAAGAAATAATGGAACTCTAGAAGAGGACATTGCAGAACTGGAAATTGCCATAGGGATCGAGAAAAGAGCTAAAAGAGTCGCTGAACTAAAAAGCATTGTAGAAGTGGCCAAGGAAATAATTTCATGCCGTGTGCTCCCTACCCGTGGAGCTTTTGACCTTTACTGGAAGCACAAAAATTCTCATCTCGGAACTGAGCATAAAGGATTTTATAGGGCAAGTGACACTTTTGCGACCTTATCTCAGCACCTAAATATTGCTCAAGTTATTGCTTCCGGGAAAGGGTATTTATGTGAGGCGTATAATACTGACATCACTAAACTTCAGGAGACATTAACCTTGATGACAAAGGAACATTTGGGGAATGCGTTTTCTTCCGAGGTTGGCAAGCGACTTAGCAATTCCTTTCAATCGGCCTTAAGTTGTCTTGACACAAAAAAAGACAGAGACATTTTTATGGGAATTTTTGCTCATCTGACAAGTGCCAATACTGTAATGCGACTACAGAATCTTCAAAACAGGGGAGCAATAGTGCGTCAAGCAGTAAGAACTGATTCTCTTTTCAGAAACTATGAAACTATGACATCAGTCCTCTCTGTTCGCAGTGATATGACTAATAAACAGCAGCAGGAGTTTGAAAGAAAGAAATTGAAAAAGCTATCTGCAAAATATTTCAAATCCATATGTGATGGTCGTGGTCGGAGGCTCAAATGCGAAGAATTTCCGGAACTCCCCTTCCTGCTCGAATATGCCTTTGGACAACAAGATGTTCTTGAAAGGGGTGGCGGTGGACTACAGGCGCACTCAAAGTTGTACGAGAATACGCTTTATAAAGCAATGGATAACAAAACAATAATGCGTGAGGCTCGTGATGTTATTCTCGCTTTGGCGGATGAAAACTTTGACGTCAGTCTTTCCTGTCTTTACACGTACACCATGAATTATAAAAAAGGCACAAATCAGGCAAAGAGGCATCATATTGGAAGAAATGTGAATGCAAACATATCGCTTCATAAGGCACCCAGCACAGGAGACTTTAAGCATCCAGTCAACGCACACTGGTCCACTTCACATGTCAATTTCATTTGTGATGAAGCAAATCAGTACAAAAGTTCTTGCATGATAGACTCCAAGGATGCCAAGTGCATCATCAATGGTGAGTTACCTCCTGTTCTCAAACCTGGAAAGACTTGGAAAAGTATAGAGTATCCAGATCATACCTTTGACCAATCGAGGAACAATGCTGTGACGCCAATAACTCACTTATTTTTACAGTCAAACGTTTTACCTTTTAACACGCCTGCTCTCAATTCTGCCAATCTAAATGTCCCAGGAACTCAAACAGAGGTTAAAGTTACGCGAACAGGAGAAGCTGTGACATTGATAAACTTGTCGCTTTATGAGCCAGAAACTGTGCTGAGAGTGTTTAACGAAATATTCTATCTCATGTCCATACCAGAACTGGATGCATTTTTTCGTAACCCAGAAACACTGCAAGTTAAAGAAGTTTTCATTTTCGTTGTTGATAACGGTCCTTCAGAGGCACCCGCAAAGCGTTGCCATGCCGCAGAAAATAAAGCCCTTGAAAGACATGAACCTTTTAGCTCCAAGCAAATTAACCCATCTGCAGTTCCTGGAACCGAAGCCCACAAAGAGAACATGGAGAAAATGGCGACTGATGTGAGAGCGGCAATAGATGGCACCATGTTTAACAAAGAACCAATTCACTGCTTCCGTGGTGTTGGAGATCGTCTTGTTTTTGACGATGACGAGGGGCTCAAGTACTTCTCTTCCCTGTGCAAAGATCGCAAGGAATCTTGTGATCTTCATTACAGTGCTGTTAAGAATGGCATATATGGTTATCTTGTACAGAACTGGGGGGTTGAAGAAAACTTCACAGGAAGTTACGCTGATGACTATCGCTCCCTGGAGTCTGCTCTTGAAGGCGGGAGGGGGGTGTTTTGTCTTGGAAATCCAGACAGGAGGGGGGGTCTTGTGCTTCAGGAAATCCAGAAATCAGGTGCTGATGCTTTGGAGTTGAACTTATCATGTCCTCATGGGATGGGAGAGAGAGGCATGGGTTTAGCTTGTGGCCAGGATCCTGAGCTGGTCCGTAACATTTGCCGTTGGGTGCGAGGTGCCATCAAAATTCCATTTTTTGCCAAGCTCACTCCTAATGTCACGGATATTGTCAACATTGCAAGAGCTGCTAAAGAAGTGATGCATAATTCCACCTCGTTCCCAGGGTCTCTCATCTTACCGCTCCTGAAAGACCCTGGGAACGAGGCTGATGCATAG

Transcript

evm.model.contig_11720.5

ATGTCTTCGCGAGTTGCTTCGAAAACGACTGTTGTACCGCCAGTCATAAGCACTTTGGGTACACCACAACTGATGTTTCTACGAAAAGCAGACCGCACAACAGATCCATCTTTGATGAGAAAAATGCCTCCATTGAACACGTGCCAAAGAGTTCGCTCAGAGTTATATAAAATGCAAGAGAGTGCATCGGATGAAGTTCAACAACAGTGCAAGCCAGTTGTGAGATGGCAGAACTTTGGCACGTTTTCCAGGGATGACATTGCTTATTTCATACAGCAGTACCAACTTAAGGCCACAAAAAAGGATGTGCAAGATGAAGAAGCGTGGTTTGATCAACTATTAACCCTGTACTCTTCAAAAGCAAGCAGATCATTCGTATCTAATGTGAGAAGTTTTATGGAACACATTTGGATGTCTTCGCCAGATTCTACTGTGTTATCCAGCGGAATTACAGCAGAACAGCTAATTTGCACTGAAGCATTCATCCACTCAGAGCGAGCTAAAGAGCGACTGTGTAGTACTATTACTAACAAACTACCGCAGTTGAAATACATTCATTTTGCCCTAAATGTAAAACGAATGAATTATGGAAAGGTTTTGGTGGGAAATGGATATCATTGGACCTACTTCGTTTTTAGTACTTCACTCGATGAACTCTATTATGGTGATAGTCTTGGTTGGAAGTTACCTTCAAATCTTCTTACAGTTATGAAACCAGTGTTTGAAGCACTTAACACGTTCAGTGGAAAATCCTACACCAAACCTCCTTATCCCGTCCTTATGCATCAACCAGGGGTAGCACACGTTGAGCAGCACGAATGTGGTAGTTCTTGCTTCAAAGCTTTTCCACTTCAGACATGTGGTTTCGCATGTGGTTTGACACCTGTTTTCATGGCGGCAATAGCTGGAAGCAGAGAAGAACTGTGGAAGCACATGATTAGAGAAAGAAATCCTAATCAAAACGTATTGATAGATCGGATAGTAACAGCGAGCCCGTCAGGTGCTAGCAAAACAAGTCCGTCAGCTACTTACACAGCGAGTCTTTCAGCCACTAGGAAAATAAGTCCATCAGGCAATAGTGAAACAATTCCGTCAGCTGCAAGTAAAGCAAGTCCGTCAGCCACAAGCAAAGCAAGTCCGTCAGCTGCTAGTAAAGCAAGTCCGTCAGGCACTAGCAAAGCAAGTCCATCAGCTGCTAGCAAAGCAAGTCCGTCGGCTGCCAGTAAAGCAAGTCCATCAGTCACTAGCAAAGCAAGTCCGTCAGGCACTAACAAGGCGAGTCCATCAGCTGCCAGTGAAGCAAGTCCATCAGCCACTAGCAAAGCAAGTCCATCAGGCACTAACAAGGCGAGTCCATCAGCTGCCAGTGAAGCAAGTCCATCAGCCACTAGCAAAGCAAGTCCATCAGGCACTAGCAAGGCGAGTCCATCAGCTGCCAGTGAAGCAAGTCCATCAGCCACTAGCAAAGCAAGTCCATCAGCTGCTAGCAAAGCAAGTCCATCAGCCACTAGCAAGGGAAGTCCATCAGCTGCCAGTAAAGCAAGTCCATCAGCTGCCAGCAAAGCAAGTCCGTCAGCTGCCAGTAAAGCAAGTCCATCAGTCACTAGCAAACCAAGTCCGTCAGGCACTAGCAAAGCAAGTCTGTCAGCTGCCAATAAAGCAAGTCCATCAGTCACTAGCAAAGCAAGTCCGTCAGCCACTAGCAAAGCAAGTCCGTCAGCTACTAGCAAAGCAAGTCTGTCAGCTGCTAGCAAAGCAAGTCCGTCAGGCACTAGCAAACTAACTCCATCAACTGCCAGTAAAGCATGTCCGTCAAGCACTAGCAAGGCAAGTCCGTCAGTCACTAGTAAAGAAAGTCCGTTACCCGCTAGTAAAGCAAGTCCGTCAGCCACAAGCAAGGCAAGTCCTGGCAGTAAAGCAGCTACTAGTAAAGCAAGGCCGTCACCCGCTAGTGAAGCAAGTCCGTTACCCGCTAGTAAAGCAAGTCCGTCAGCTGCTAGTAAAGCAAGTCCGTCAGCTGCTAGTAACGCAAGTCCGTCAGCCACAAGCAAAGCAAGTCTGTCAGCTGCTAGCAAAGCAACTCCATTAAACACTGGCAAAGCGAGTCCGTCACCCACTAGTAAGGCAAGTCCGTCAACTGCTAGTCAAGCAAGTCCATCAGGCACTAGCTCAGTGAGTCCGCCAGGAACTTGCACAGCAAGAACACCAGCAACTAGCAAAGCAAGTCCGTCAAGCGCTAACACAGCAAGTCCATCAGGCACTAGCACAGCAAAATGTACAGAAAGTCCCTCCGTCTCTTTATCTGGCGATAAGCTACTTCCATTTCCCGGCGTTTCTAAAAGCTTTTACAAGCAGCAAGGAGAAAATTGGGCTAAAAATAATTCGCGCAATTTAAAGCGAACGGAAACAATTTGTATCAAGAAAAACCGCGAAACCATAGGCAAgtgcaaagaaagaaataatGGAACTCTAGAAGAGGACATTGCAGAACTGGAAATTGCCATAGGGATCGAGAAAAGAGCTAAAAGAGTCGCTGAACTAAAAAGCATTGTAGAAGTGGCCAAGGAAATAATTTCATGCCGTGTGCTCCCTACCCGTGGAGCTTTTGACCTTTACTGGAAGCACAAAAATTCTCATCTCGGAACTGAGCATAAAGGATTTTATAGGGCAAGTGACACTTTTGCGACCTTATCTCAGCACCTAAATATTGCTCAAGTTATTGCTTCCGGGAAAGGGTATTTATGTGAGGCGTATAATACTGACATCACTAAACTTCAGGAGACATTAACCTTGATGACAAAGGAACATTTGGGGAATGCGTTTTCTTCCGAGGTTGGCAAGCGACTTAGCAATTCCTTTCAATCGGCCTTAAGTTGTCTTGACACAAAAAAAGACAGAGACATTTTTATGGGAATTTTTGCTCATCTGACAAGTGCCAATACTGTAATGCGACTACAGAATCTTCAAAACAGGGGAGCAATAGTGCGTCAAGCAGTAAGAACTGATTCTCTTTTCAGAAACTATGAAACTATGACATCAGTCCTCTCTGTTCGCAGTGATATGACTAATAAACAGCAGCAGGAgtttgaaagaaagaaattgaaaaagctatctgcaaaatatttcaaatccaTATGTGATGGTCGTGGTCGGAGGCTCAAATGCGAAGAATTTCCGGAACTCCCCTTCCTGCTCGAATATGCCTTTGGACAACAAGATGTTCTTGAAAGGGGTGGCGGTGGACTACAGGCGCACTCAAAGTTGTACGAGAATACGCTTTATAAAGCAATGGATAACAAAACAATAATGCGTGAGGCTCGTGATGTTATTCTCGCTTTGGCGGATGAAAACTTTGACGTCAGTCTTTCCTGTCTTTACACGTACACCATGAATTATAAAAAAGGCACAAATCAGGCAAAGAGGCATCATATTGGAAGAAATGTGAATGCAAACATATCGCTTCATAAGGCACCCAGCACAGGAGACTTTAAGCATCCAGTCAACGCACACTGGTCCACTTCACATGTCAATTTCATTTGTGATGAAGCAAATCAGTACAAAAGTTCTTGCATGATAGACTCCAAGGATGCCAAGTGCATCATCAATGGTGAGTTACCTCCTGTTCTCAAACCTGGAAAGACTTGGAAAAGTATAGAGTATCCAGATCATACCTTTGACCAATCGAGGAACAATGCTGTGACGCCAATAACTCACTTATTTTTACAGTCAAACGTTTTACCTTTTAACACGCCTGCTCTCAATTCTGCCAATCTAAATGTCCCAGGAACTCAAACAGAGGTTAAAGTTACGCGAACAGGAGAAGCTGTGACATTGATAAACTTGTCGCTTTATGAGCCAGAAACTGTGCTGAGAGTGTTTAACGAAATATTCTATCTCATGTCCATACCAGAACTGGATGCATTTTTTCGTAACCCAGAAACACTGCAAGTTAAAGAAGTTTTCATTTTCGTTGTTGATAACGGTCCTTCAGAGGCACCCGCAAAGCGTTGCCATGCCGCAGAAAATAAAGCCCTTGAAAGACATGAACCTTTTAGCTCCAAGCAAATTAACCCATCTGCAGTTCCTGGAACCGAAGCCCACAAAGAGAACATGGAGAAAATGGCGACTGATGTGAGAGCGGCAATAGATGGCACCATGTTTAACAAAGAACCAATTCACTGCTTCCGTGGTGTTGGAGATCGTCTTGTTTTTGACGATGACGAGGGGCTCAAGTACTTCTCTTCCCTGTGCAAAGATCGCAAGGAATCTTGTGATCTTCATTACAGTGCTGTTAAGAATGGCATATATGGTTATCTTGTACAGAACTGGGGGGTTGAAGAAAACTTCACAGGAAGTTACGCTGATGACTATCGCTCCCTGGAGTCTgctcttgaaggcgggaggggggtgttttgtcttggaaatccagacaggagggggggtcttgtgcttcaggaaatccagAAATCAGGTGCTGATGCTTTGGAGTTGAACTTATCATGTCCTCATGGGATGGGAGAGAGAGGCATGGGTTTAGCTTGTGGCCAGGATCCTGAGCTGGTCCGTAACATTTGCCGTTGGGTGCGAGGTGCCATCAAAATTCCATTTTTTGCCAAGCTCACTCCTAATGTCACGGATATTGTCAACATTGCAAGAGCTGCTAAAGAAGtGATGCATAATtccacctcgttcccagggtctctcatcttaccgctcctgaaagaccctgggaacgaggctgatGCATAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01180 all species →	DHO_dh	Dihydroorotate dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005720 all species →	Domain	Dihydroorotate dehydrogenase, catalytic	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43073 all species →	DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0002058 all species →	Molecular Function	uracil binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006210 all species →	Biological Process	thymine catabolic process	Interproscan
GO:0006212 all species →	Biological Process	uracil catabolic process	Interproscan
GO:0017113 all species →	Molecular Function	dihydropyrimidine dehydrogenase (NADP+) activity	Interproscan
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08868	ALPK; alpha-kinase	-	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.