Gene detail

Detailed information of evm.model.contig_11798.4 in Platygyra sinensis

Genomic Location: contig_11798:21259...43555
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04670 all species →	Gtr1_RagA	Gtr1/RagA G protein conserved region	Domain	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006762 all species →	Family	Gtr1/RagA G protein	Interproscan
IPR039400 all species →	Family	RagC/D	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11259 all species →	RAS-RELATED GTP BINDING RAG/GTR YEAST	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0009267 all species →	Biological Process	cellular response to starvation	Interproscan
GO:0010507 all species →	Biological Process	negative regulation of autophagy	Interproscan
GO:1990131 all species →	Cellular Component	Gtr1-Gtr2 GTPase complex	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16186	RRAGC_D; Ras-related GTP-binding protein C/D	-	Shigellosis	ko05131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.