Detailed information of evm.model.contig_12089.7 in Platygyra sinensis

Genomic Location: contig_12089:57995...70282
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12062
all species →		HSNSDheparan sulfate-N-deacetylaseFamilyInterproscan
PF00685
all species →		Sulfotransfer_1Sulfotransferase domainDomainInterproscan
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037359
all species →		FamilyHeparan sulfate sulfotransferaseInterproscan
IPR021930
all species →		DomainHeparan sulphate-N-deacetylaseInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000863
all species →		DomainSulfotransferase domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10605
all species →		HEPARAN SULFATE SULFOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0008146
all species →		Molecular Functionsulfotransferase activityInterproscan
GO:0015014
all species →		Biological Processheparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic processInterproscan
GO:0015016
all species →		Molecular Function[heparan sulfate]-glucosamine N-sulfotransferase activityInterproscan
GO:0019213
all species →		Molecular Functiondeacetylase activityInterproscan
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_12089.7.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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