Gene detail

Detailed information of evm.model.contig_12253.3 in Platygyra sinensis

Genomic Location: contig_12253:64872...66209
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07701 all species →	HNOBA	Heme NO binding associated	Domain	Interproscan
PF00211 all species →	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan
PF08376 all species →	NIT	Nitrate and nitrite sensing	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR011645 all species →	Domain	Haem NO binding associated	Interproscan
IPR050401 all species →	Family	Cyclic nucleotide synthase	Interproscan
IPR001054 all species →	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR013587 all species →	Domain	Nitrate/nitrite sensing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11920 all species →	GUANYLYL CYCLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004383 all species →	Molecular Function	guanylate cyclase activity	Interproscan
GO:0006182 all species →	Biological Process	cGMP biosynthetic process	Interproscan
GO:0001653 all species →	Molecular Function	peptide receptor activity	Interproscan
GO:0004016 all species →	Molecular Function	adenylate cyclase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007168 all species →	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan
GO:0009190 all species →	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_12253.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.