Detailed information of evm.model.contig_12533.1 in Platygyra sinensis

Genomic Location: contig_12533:497...4952
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05253
all species →		zf-U11-48KU11-48K-like CHHC zinc fingerDomainInterproscan
PF11722
all species →		zf-TRM13_CCCHCCCH zinc finger in TRM13 proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022776
all species →		DomainTRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainInterproscan
IPR039044
all species →		FamilytRNA:m(4)X modification enzyme Trm13Interproscan
IPR021721
all species →		DomainZinc finger, CCCH-type, TRM13Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12998
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008175
all species →		Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0106050
all species →		Molecular FunctiontRNA 2'-O-methyltransferase activityInterproscan
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_12533.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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