Detailed information of evm.model.contig_12799.1 in Platygyra sinensis

Genomic Location: contig_12799:873...24321
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00514
all species →
ArmArmadillo/beta-catenin-like repeatRepeatInterproscan
PF01477
all species →
PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036392
all species →
Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR000225
all species →
RepeatArmadilloInterproscan
IPR001024
all species →
DomainPLAT/LH2 domainInterproscan
IPR028435
all species →
FamilyPlakophilin/Delta cateninInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10372
all species →
PLAKOPHILLIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0005912
all species →
Cellular Componentadherens junctionInterproscan
GO:0007043
all species →
Biological Processcell-cell junction assemblyInterproscan
GO:0045296
all species →
Molecular Functioncadherin bindingInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_12799.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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