Detailed information of evm.model.contig_13724.13 in Platygyra sinensis

Genomic Location: contig_13724:115584...121396
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09607
all species →
BrkDBDBrinker DNA-binding domainDomainInterproscan
PF03184
all species →
DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03221
all species →
HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF00578
all species →
AhpC-TSAAhpC/TSA familyDomainInterproscan
PF10417
all species →
1-cysPrx_CC-terminal domain of 1-Cys peroxiredoxinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018586
all species →
DomainBrinker DNA-binding domainInterproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR004875
all species →
DomainDDE superfamily endonuclease domainInterproscan
IPR006600
all species →
DomainHTH CenpB-type DNA-binding domainInterproscan
IPR045020
all species →
Family1-Cys peroxiredoxinInterproscan
IPR000866
all species →
DomainAlkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantInterproscan
IPR010921
all species →
Homologous_superfamilyTrp repressor/replication initiatorInterproscan
IPR013766
all species →
DomainThioredoxin domainInterproscan
IPR036249
all species →
Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR019479
all species →
DomainPeroxiredoxin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43503
all species →
MCG48959-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0045454
all species →
Biological Processcell redox homeostasisInterproscan
GO:0051920
all species →
Molecular Functionperoxiredoxin activityInterproscan
GO:0098869
all species →
Biological Processcellular oxidant detoxificationInterproscan
GO:0016209
all species →
Molecular Functionantioxidant activityInterproscan
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan
GO:0043565
all species →
Molecular Functionsequence-specific DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_13724.13.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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