Gene detail

Detailed information of evm.model.contig_13726.3 in Platygyra sinensis

Genomic Location: contig_13726:27359...36893
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07967 all species →	zf-C3HC	C3HC zinc finger-like	Domain	Interproscan
PF08600 all species →	Rsm1	Rsm1-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012935 all species →	Domain	Zinc finger, C3HC-like	Interproscan
IPR052238 all species →	Family	SCF(NIPA) complex component	Interproscan
IPR013909 all species →	Domain	Nuclear-interacting partner of ALK/Rsm1-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15835 all species →	NUCLEAR-INTERACTING PARTNER OF ALK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_13726.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.