Gene detail

Detailed information of evm.model.contig_13840.3 in Platygyra sinensis

Genomic Location: contig_13840:36749...39628
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00627 all species →	UBA	UBA/TS-N domain	Domain	Interproscan
PF09668 all species →	Asp_protease	Aspartyl protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019103 all species →	Domain	Aspartic peptidase, DDI1-type	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15397 all species →	SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004190 all species →	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11885	DDI1; DNA damage-inducible protein 1	-	Proteasome	ko03051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.