Gene detail

Detailed information of evm.model.contig_13953.2 in Platygyra sinensis

Genomic Location: contig_13953:3899...14754
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00581 all species →	Rhodanese	Rhodanese-like domain	Domain	Interproscan
PF06617 all species →	M-inducer_phosp	M-phase inducer phosphatase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001763 all species →	Domain	Rhodanese-like domain	Interproscan
IPR036873 all species →	Homologous_superfamily	Rhodanese-like domain superfamily	Interproscan
IPR000751 all species →	Family	M-phase inducer phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10828 all species →	M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000086 all species →	Biological Process	G2/M transition of mitotic cell cycle	Interproscan
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0010971 all species →	Biological Process	positive regulation of G2/M transition of mitotic cell cycle	Interproscan
GO:0110032 all species →	Biological Process	positive regulation of G2/MI transition of meiotic cell cycle	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:1902751 all species →	Biological Process	positive regulation of cell cycle G2/M phase transition	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05866	CDC25B; M-phase inducer phosphatase 2	EC:3.1.3.48	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.