Gene detail

Detailed information of evm.model.contig_14033.3 in Platygyra sinensis

Genomic Location: contig_14033:11238...13936
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01938 all species →	TRAM	TRAM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007197 all species →	Domain	Radical SAM	Interproscan
IPR002792 all species →	Domain	TRAM domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11918 all species →	RADICAL SAM PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0035598 all species →	Molecular Function	N6-threonylcarbomyladenosine methylthiotransferase activity	Interproscan
GO:0035600 all species →	Biological Process	tRNA methylthiolation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_14033.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.