Gene detail

Detailed information of evm.model.contig_15629.9 in Platygyra sinensis

Genomic Location: contig_15629:59818...72299
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_15629.9

ATGCCACCTAGTGTGACTCCAACTGCTACAGTTGAACCTGTCCAACCACACTGGTTTTATAGGAAAGGCAATTCTGCCTGGATGCCATTTTCATATATTGATTCTGATATCCTGGAGCAGGCTTTGAAAGCATCTTCAGCTAATGGGGACAGAATCGTTGCTACAGATGGGGGACGATATGATGTTAACCTGGACAAGAGGCTACGATACCCTCTCTACTGGGAGGAGGATGTGTCTGTAGTGCGGCGATGCTCATGGTATTACAAAGGAGATGCACAGTCCAAACTTGTGCCATATAAGGAAGACATGGCAGCTAGACTTGAGGCTGAATTTCTATCAACATTTCGTGAGAACAAGTGGCCTCGCAGAGTGGAGTTATCAGAAGGAGAGTACATTATGATGCACAATGCTAATGTTATGGTGCATTTTGTGCCCAACAATGAGTCAGAAAACTGGAGTGGAGAGGATACTGTAGCAAGGCCAAAGGTTGTCAGAAGAGGAGTGACAGATATTGAAGATGACATTGATGATGGTGAACCAGCTCAAATTGATCATCTGATTTTTGTTGTCCATGGTATTGGGCCAATTGCAGACTTAAACTTTAGGAATATTATTGAATGTGCGAATGACCAAGACAAACTACAGGAAATTGTAACTCAAGTGAAGGAAGAAAGCAGCAAGGCCTATCTTGACATGAACGTCAAGAAGACAAAGACGATGATCATCTTACGAGACCCAGAGGGGAAGAAAGTAGATATCAAAGTTGATGATGAAACTCTACAGCAAGTTGAAAAATTCATCTATTTAGGCATGCAAATATTAGAAGAAATAATAACAGATAAAGAAATTGAAAGAAGAAAGAACATTTCAAAAGAAAAATTCAACTCCATGGCTAAAATTTTGAAATCAAAACGCTTAAAACTCGCTACAAAACTCAAGATTGTAAAATGTTATATCTCTTCAATCTTCACATATGGGTGTGAGGCATGGACTCTTTCCAAAGTTCTTGAAGCTAAAATTGAAGTCTTCGAAATGTGGTGCCTCAGAGAGTTTGGGAATATTATGTGGAAAGACAAAGTTACAAATGAAAGTGTTCTCACCAAGCTTAAGACAAAAAGACAGCTCTTGAGTGACATTCAAAAAAGAAAACCCAAGTATTTCGGCCATATCAAGAGAAAAAACAATATCTTGACGACAGTATTAGAAGAAAAGTTACTGAAGGCAAGAGACCAAGAGGGCGGGCGCGGAACAACTGGATGGCGGACATCAAGGAGTGGACCTGCCAGCCAGCTTACGCCTGCACCAGCCAAGCTGCCGATCGCGACCTGTGGACTGTCATTGCACGTCAACCGTCGAAGAGGCGATGACACTCCCAGATACCAGATAGTTCTAGAACCAAATCAAATTAAAAACCTTTTTTCACATAGTCTTTTTCATTCCTTCCTTATTTCTATGCTTGCAGTTAATGATTTTCGTAAAGTGAGTCTTCAAATGTTGTTTGATCACCACGAGGAGCTGTCCAGAGGCCGAGCTATTGGAAGAGTGGAATTCCTTCCAGTACAGTGGCATTCCAGGCTTCATAATGATTCCACGGGAGTGGATGAAAGACTTCAGTCCATCTCTTTGAGCAGCATACGTCGCTTAAGAGAGTTTACAAACAGCACTCTTCTTGATATTCTGTTTTACACAAGTCCCACATATTGTCAAACCATTGTCAACACAGTAGGTGAAGAAATACAGCGGCTGCTGGAAATCTTCAAGAAAAGGAATCCTATGTTTAATGGAAAATATTCAGTGTGCGGACACAGTTTAGGTTCAAGTATACTGTTTGATATTCTTCAGCATCAGAAAGTTCAGCGTGGCCAGTCCTCGACAGGAAAGCAGCCTATGATTGAGCAAGTGAATAAAACTTTGAACACAGACGGCCCTGCAGCCGCTGACAACAACGACACGACACAAGACTCAGACGAACAATCGGTTGACAGTGAAGAAGAGTCGTACCCAGCTCTCGGAGATGCTCTAACACAACTCGGTCTACCTGAATACGTGGGGCTGTTCGAGTCTGAAGAAATGGACATGGAGACATTTCTGCTGTGTGGCGAGGAGGACATGAAAGAGATGGGAATTCCCATGGGACCGAGAAAGAAATTGATGGGATACCTGAGAAATCAGAAACAAAACATGGAAAAAAGAAAACTCGAAAGAGAGGAGAATAAAAAGGCCAAGGCAGAAGCGAATGCTAAAGCAAAAGCTGAACGGCAGAAGTTAAAAGAGGCAAGGACAAAAGAGCAAACAATTTCCAGTCCTGAAGTGACGTCTTGCACAGTTTTGGGGAAGCCAGATGTAGGGGCCGATAATTCGTTATCTTTAGGTGCTGTAGGCAGCGTGGAAGTGGTTTATCAACAGGGACTGGCTGGAACAGGACAGCCTTACGTGGAATACCCACAGCTGGATCTTAACTTTTACGCTTTGTTTGCACTGGGTTCTCCTATAGGAATGTTTCAAACTGTAAGGGGTGTCGATGAAATCGGGCTCAACTTTCAGTTTCCAACCTGTCCGCGACTGTTCAATATATTCCACCCGTTTGATCCTGTGGCATATCGTATCGAACCTCTAGTGAATCCATCAATCCAAGCCGAGCCTGTTGTGATGCCCCATCACAAGGGAAGAAAAAGAATGCATATAGAACTCCGTGAGAATCTGACAAGACTGGGCGCTAATCTTAAGCAGAGCCTCATTGAGTCTGCGCGGAAAACATGGGAATCAATCAATGAATTTGCTCGAGCTCACTCGACCCAGGGCGTTGACCAGCAAGACGCTGCTGTGGAGGAGGCCACTGAGGCGATAGAGGCTCCCCCAGATCCCCCGGCAGAGGTAGTTCAAGTAGGACGACTGAACGGTGGTCAGCGGATTGACTACGTACTTCAAGAGAAACCAATAGAAAGCTTGAATGAATACCTGTTCGCACTCAGCAGTCACGTGTGCTATTGGGTCTCCGAAGATACCGCTCTCTTCATGTTGAAGGAAATTTACAGAGATAAACTCCAAGATTGA

Transcript

evm.model.contig_15629.9

ATGCCACCTAGTGTGACTCCAACTGCTACAGTTGAACCTGTCCAACCACACTGGTTTTATAGGAAAGGCAATTCTGCCTGGATGCCATTTTCATATATTGATTCTGATATCCTGGAGCAGGCTTTGAAAGCATCTTCAGCTAATGGGGACAGAATCGTTGCTACAGATGGGGGACGATATGATGTTAACCTGGACAAGAGGCTACGATACCCTCTCTACTGGGAGGAGGATGTGTCTGTAGTGCGGCGATGCTCATGGTATTACAAAGGAGATGCACAGTCCAAACTTGTGCCATATAAGGAAGACATGGCAGCTAGACTTGAGGCTGAATTTCTATCAACATTTCGTGAGAACAAGTGGCCTCGCAGAGTGGAGTTATCAGAAGGAGAGTACATTATGATGCACAATGCTAATGTTATGGTGCATTTTGTGCCCAACAATGAGTCAGAAAACTGGAGTGGAGAGGATACTGTAGCAAGGCCAAAGGTTGTCAGAAGAGGAGTGACAGATATTGAAGATGACATTGATGATGGTGAACCAGCTCAAATTGATCATCTGATTTTTGTTGTCCATGGTATTGGGCCAATTGCAGACTTAAACTTTAGGAATATTATTGAATGTGCGAATGACCAAGACAAACTACAGGAAATTGTAACTCAAGTGAAGGAAGAAAGCAGCAAGGCCTATCTTGACATGAACGTCAAGAAGACAAAGACGATGATCATCTTACGAGACCCAGAGGGGAAGAAAGTAGATATCAAAGTTGATGATGAAACTCTACAGCAAGTTGAAAAATTCATCTATTTAGGCATGCAAATAttagaagaaataataacagataaagaaattgaaagaagaaagaacatttcaaaagaaaaattcaactCCATGgctaaaattttgaaatcaaaacgCTTAAAACTCGCTACAAAACTCAAGATTGTAAAATGTTATATCTCTTCAATCTTCACATATGGGTGTGAGGCATGGACTCTTTCCAAAGTTCTTGAAGCTAAAATTGAAGTCTTCGAAATGTGGTGCCTCAGAGAGTTTGGGAATATTATGTGGAAAGACAAAGTTACAAATGAAAGTGTTCTCACCAAGCTTAAGACAAAAAGACAGCTCTTGAGTGACATTCAAAAAAGAAAACCCAAGTATTTCGGccatatcaagagaaaaaacaatATCTTGACGACAGTATTAGAAGAAAAGTTACTGAAGGCAAGAGACCAAGAGGGCGGGCGCGGAACAACTGGATGGCGGACATCAAGGAGTGGACCTGCCAGCCAGCTTACGCCTGCACCAGCCAAGCTGCCGATCGCGACCTGTGGACTGTCATTGCACGTCAACCGTCGAAGAGGCGATGACACTCCCAGATACCAGATAGTTCTAGAACCAAATCAAATTAAAAACCTTTTTTCACATAGTCTTTTTCATTCCTTCCTTATTTCTATGCTTGCAGTTAATGATTTTCGTAAAGTGAGTCTTCAAATGTTGTTTGATCACCACGAGGAGCTGTCCAGAGGCCGAGCTATTGGAAGAGTGGAATTCCTTCCAGTACAGTGGCATTCCAGGCTTCATAATGATTCCACGGGAGTGGATGAAAGACTTCAGTCCATCTCTTTGAGCAGCATACGTCGCTTAAGAGAGTTTACAAACAGCACTCTTCTTGATATTCTGTTTTACACAAGTCCCACATATTGTCAAACCATTGTCAACACAGTAGGTGAAGAAATACAGCGGCTGCTGGAAATCTTCAAGAAAAGGAATCCTATGTTTAATGGAAAATATTCAGTGTGCGGACACAGTTTAGGTTCAAGTATACTGTTTGATATTCTTCAGCATCAGAAAGTTCAGCGTGGCCAGTCCTCGACAGGAAAGCAGCCTATGATTGAGCAAGTGAATAAAACTTTGAACACAGACGGCCCTGCAGCCGCTGACAACAACGACACGACACAAGACTCAGACGAACAATCGGTTGACAGTGAAGAAGAGTCGTACCCAGCTCTCGGAGATGCTCTAACACAACTCGGTCTACCTGAATACGTGGGGCTGTTCGAGTCTGAAGAAATGGACATGGAGACATTTCTGCTGTGTGGCGAGGAGGACATGAAAGAGATGGGAATTCCCATGGGACCGAGAAAGAAATTGATGGGATACCTGAGAAATCAGAAACAAAACATGgaaaaaagaaaactcgAAAGAGAGGAGAATAAAAAGGCCAAGGCAGAAGCGAATGCTAAAGCAAAAGCTGAACGGCAGAAGTTAAAAGAGGCAAGGACAAAAGAGCAAACAATTTCCAGTCCTGAAGTGACGTCTTGCACAGTTTTGGGGAAGCCAGATGTAGGGGCCGATAATTCGTTATCTTTAGGTGCTGTAGGCAGCGTGGAAGTGGTTTATCAACAGGGACTGGCTGGAACAGGACAGCCTTACGTGGAATACCCACAGCTGGATCTTAACTTTTACGCTTTGTTTGCACTGGGTTCTCCTATAGGAATGTTTCAAACTGTAAGGGGTGTCGATGAAATCGGGCTCAACTTTCAGTTTCCAACCTGTCCGCGACTGTTCAATATATTCCACCCGTTTGATCCTGTGGCATATCGTATCGAACCTCTAGTGAATCCATCAATCCAAGCCGAGCCTGTTGTGATGCCCCATCACAAGGGAAGAAAAAGAATGCATATAGaacTCCGTGAGAATCTGACAAGACTGGGCGCTAATCTTAAGCAGAGCCTCATTGAGTCTGCGCGGAAAACATGGGAATCAATCAATGAATTTGCTCGAGCTCACTCGACCCAGGGCGTTGACCAGCAAGACGCTGCTGTGGAGGAGGCCACTGAGGCGATAGAGGCTCCCCCAGATCCCCCGGCAGAGGTAGTTCAAGTAGGACGACTGAACGGTGGTCAGCGGATTGACTACGTACTTCAAGAGAAACCAATAGAAAGCTTGAATGAATACCTGTTCGCACTCAGCAGTCACGTGTGCTATTGGGTCTCCGAAGATACCGCTCTCTTCATGTTGAAGGAAATTTACAGAGATAAACTCCAAGATTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02862 all species →	DDHD	DDHD domain	Family	Interproscan
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF02825 all species →	WWE	WWE domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004177 all species →	Domain	DDHD domain	Interproscan
IPR004170 all species →	Domain	WWE domain	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR037197 all species →	Homologous_superfamily	WWE domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23509 all species →	PA-PL1 PHOSPHOLIPASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0004620 all species →	Molecular Function	phospholipase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_15629.9.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.