Gene detail

Detailed information of evm.model.contig_15848.1 in Platygyra sinensis

Genomic Location: contig_15848:11531...18278
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14767 all species →	RPA_interact_M	Replication protein A interacting middle	Family	Interproscan
PF14766 all species →	RPA_interact_N	Replication protein A interacting N-terminal	Family	Interproscan
PF14768 all species →	RPA_interact_C	Replication protein A interacting C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028155 all species →	Domain	RPA-interacting protein, central domain	Interproscan
IPR028156 all species →	Family	RPA-interacting protein	Interproscan
IPR028158 all species →	Domain	RPA-interacting protein, N-terminal domain	Interproscan
IPR028159 all species →	Domain	RPA-interacting protein, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31742 all species →	RPA-INTERACTING PROTEIN RPAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_15848.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.