Detailed information of evm.model.contig_16013.1 in Platygyra sinensis

Genomic Location: contig_16013:8614...28426
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21144
all species →		Aquarius_N_3rdIntron-binding protein aquarius insert domainDomainInterproscan
PF13086
all species →		AAA_11AAA domainDomainInterproscan
PF13087
all species →		AAA_12AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045055
all species →		FamilyDNA2/NAM7-like helicaseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048967
all species →		DomainRNA helicase aquarius, insertion domainInterproscan
IPR047187
all species →		DomainUpf1-like, C-terminal helicase domainInterproscan
IPR041677
all species →		DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679
all species →		DomainDNA2/NAM7 helicase-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887
all species →		DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0004386
all species →		Molecular Functionhelicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_16013.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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