Detailed information of evm.model.contig_16043.3 in Platygyra sinensis

Genomic Location: contig_16043:39981...43399
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06918
all species →		DUF1280Protein of unknown function (DUF1280)FamilyInterproscan
PF00097
all species →		zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF12560
all species →		RAG1_imp_bdRAG1 importin bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009689
all species →		FamilyProtein of unknown function DUF1280Interproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957
all species →		DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR035714
all species →		DomainRAG1 importin-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31424
all species →		PROTEIN CBG23806Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_16043.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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