Gene detail

Detailed information of evm.model.contig_16234.1 in Platygyra sinensis

Genomic Location: contig_16234:163...13765
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08029 all species →	HisG_C	HisG, C-terminal domain	Domain	Interproscan
PF01634 all species →	HisG	ATP phosphoribosyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013115 all species →	Domain	Histidine biosynthesis HisG, C-terminal	Interproscan
IPR001348 all species →	Family	ATP phosphoribosyltransferase HisG	Interproscan
IPR018198 all species →	Conserved_site	ATP phosphoribosyltransferase, conserved site	Interproscan
IPR013820 all species →	Domain	ATP phosphoribosyltransferase, catalytic domain	Interproscan
IPR015867 all species →	Homologous_superfamily	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	Interproscan
IPR011322 all species →	Homologous_superfamily	Nitrogen regulatory PII-like, alpha/beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21403 all species →	ATP PHOSPHORIBOSYLTRANSFERASE ATP-PRTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000105 all species →	Biological Process	L-histidine biosynthetic process	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0003879 all species →	Molecular Function	ATP phosphoribosyltransferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00765	hisG; ATP phosphoribosyltransferase	EC:2.4.2.17	Histidine metabolism	ko00340	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.