Gene detail

Detailed information of evm.model.contig_16270.3 in Platygyra sinensis

Genomic Location: contig_16270:19114...24142
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03378 all species →	CAS_CSE1	CAS/CSE protein, C-terminus	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005043 all species →	Domain	Exportin-2, C-terminal	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10997 all species →	IMPORTIN-7, 8, 11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0005049 all species →	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_16270.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.