Genomic Location: contig_16343:4104...47408
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families
| CDS |
| evm.model.contig_16343.1 |
| Transcript |
| evm.model.contig_16343.1 |
| Protein |
| evm.model.contig_16343.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|Alpha-Helix|UBA · all ubiquitin genes in this species |
| Ubiquitin family | UBD|Alpha-Helix|UBM · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00627 all species → | UBA | UBA/TS-N domain | Domain | Interproscan |
| PF06012 all species → | DUF908 | Domain of Unknown Function (DUF908) | Family | Interproscan |
| PF14377 all species → | UBM | Ubiquitin binding region | Motif | Interproscan |
| PF06025 all species → | DUF913 | Domain of Unknown Function (DUF913) | Family | Interproscan |
| PF02825 all species → | WWE | WWE domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015940 all species → | Domain | Ubiquitin-associated domain | Interproscan |
| IPR009060 all species → | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR018123 all species → | Domain | WWE domain, subgroup | Interproscan |
| IPR010309 all species → | Domain | E3 ubiquitin ligase, domain of unknown function DUF908 | Interproscan |
| IPR025527 all species → | Conserved_site | HUWE1/REV1, ubiquitin-binding motif | Interproscan |
| IPR010314 all species → | Domain | E3 ubiquitin ligase, domain of unknown function DUF913 | Interproscan |
| IPR037197 all species → | Homologous_superfamily | WWE domain superfamily | Interproscan |
| IPR004170 all species → | Domain | WWE domain | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37888 all species → | DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
evm.model.contig_16343.1.