Detailed information of evm.model.contig_16974.18 in Platygyra sinensis

Genomic Location: contig_16974:239638...261021
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002643 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07539
all species →		UTP20_NU3 small nucleolar RNA-associated protein 20, N-terminalDomainInterproscan
PF20416
all species →		UTP20_CU3 small nucleolar RNA-associated protein 20, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011430
all species →		DomainU3 small nucleolar RNA-associated protein 20, N-terminalInterproscan
IPR052575
all species →		FamilySmall subunit processome component 20Interproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR046523
all species →		DomainU3 small nucleolar RNA-associated protein 20, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17695
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_16974.18.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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