Detailed information of evm.model.contig_17127.1 in Platygyra sinensis

Genomic Location: contig_17127:5416...11130
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001965 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01798
all species →		NopsnoRNA binding domain, fibrillarinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045056
all species →		FamilyNucleolar protein Nop56/Nop58Interproscan
IPR042239
all species →		Homologous_superfamilyNop, C-terminal domainInterproscan
IPR036070
all species →		Homologous_superfamilyNop domain superfamilyInterproscan
IPR002687
all species →		DomainNop domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10894
all species →		NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030515
all species →		Molecular FunctionsnoRNA bindingInterproscan
GO:0031428
all species →		Cellular Componentbox C/D methylation guide snoRNP complexInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_17127.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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